Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SSR1P43307 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSR1P43307 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 RCN1P1-201ENST00000400413 996 ntBASIC18.59■□□□□ 0.57
SSR1P43307 DUX4L26-201ENST00000489078 1255 ntBASIC18.59■□□□□ 0.57
SSR1P43307 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.59■□□□□ 0.57
SSR1P43307 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.59■□□□□ 0.57
SSR1P43307 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.59■□□□□ 0.57
SSR1P43307 LINC01451-201ENST00000623792 534 ntBASIC18.59■□□□□ 0.57
SSR1P43307 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.59■□□□□ 0.57
SSR1P43307 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 AL138688.1-201ENST00000624851 1594 ntBASIC18.59■□□□□ 0.57
SSR1P43307 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SSR1P43307 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.59■□□□□ 0.57
SSR1P43307 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSR1P43307 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.58■□□□□ 0.57
SSR1P43307 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.58■□□□□ 0.57
SSR1P43307 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SSR1P43307 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.58■□□□□ 0.57
SSR1P43307 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSR1P43307 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSR1P43307 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSR1P43307 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SSR1P43307 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSR1P43307 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.58■□□□□ 0.57
SSR1P43307 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.58■□□□□ 0.56
SSR1P43307 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.58■□□□□ 0.56
SSR1P43307 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
SSR1P43307 AL390719.2-201ENST00000606993 987 ntBASIC18.58■□□□□ 0.56
SSR1P43307 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.58■□□□□ 0.56
SSR1P43307 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.58■□□□□ 0.56
SSR1P43307 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.58■□□□□ 0.56
SSR1P43307 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SSR1P43307 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SSR1P43307 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.58■□□□□ 0.56
SSR1P43307 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.58■□□□□ 0.56
SSR1P43307 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.58■□□□□ 0.56
SSR1P43307 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.58■□□□□ 0.56
SSR1P43307 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 AC080080.1-201ENST00000625121 2420 ntBASIC18.58■□□□□ 0.56
SSR1P43307 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSR1P43307 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.57■□□□□ 0.56
SSR1P43307 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 AC068418.2-201ENST00000577309 3703 ntBASIC18.57■□□□□ 0.56
SSR1P43307 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.57■□□□□ 0.56
SSR1P43307 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 KRT18P21-201ENST00000515767 1272 ntBASIC18.57■□□□□ 0.56
SSR1P43307 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.57■□□□□ 0.56
SSR1P43307 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.57■□□□□ 0.56
SSR1P43307 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SSR1P43307 AC083849.1-201ENST00000615227 514 ntBASIC18.57■□□□□ 0.56
SSR1P43307 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.57■□□□□ 0.56
SSR1P43307 BX276092.7-203ENST00000637198 1536 ntBASIC18.57■□□□□ 0.56
SSR1P43307 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSR1P43307 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms