Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS2P33552 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.88□□□□□ -0.35
CKS2P33552 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS2P33552 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.88□□□□□ -0.35
CKS2P33552 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 REXO1L11P-201ENST00000620964 1927 ntBASIC12.88□□□□□ -0.35
CKS2P33552 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CKS2P33552 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.88□□□□□ -0.35
CKS2P33552 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.87□□□□□ -0.35
CKS2P33552 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 TSPY6P-201ENST00000448518 926 ntBASIC12.87□□□□□ -0.35
CKS2P33552 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 AL138781.1-201ENST00000566567 1274 ntBASIC12.87□□□□□ -0.35
CKS2P33552 AC026271.3-201ENST00000571884 352 ntBASIC12.87□□□□□ -0.35
CKS2P33552 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.87□□□□□ -0.35
CKS2P33552 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 AC130371.2-201ENST00000619443 611 ntBASIC12.87□□□□□ -0.35
CKS2P33552 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.87□□□□□ -0.35
CKS2P33552 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 AL023875.1-201ENST00000640777 796 ntBASIC12.87□□□□□ -0.35
CKS2P33552 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 AC009949.1-201ENST00000623048 1830 ntBASIC12.87□□□□□ -0.35
CKS2P33552 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 KRT16P1-201ENST00000399124 1418 ntBASIC12.87□□□□□ -0.35
CKS2P33552 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CKS2P33552 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.87□□□□□ -0.35
CKS2P33552 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CKS2P33552 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CKS2P33552 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CKS2P33552 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CKS2P33552 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms