Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.54■□□□□ 0.4
LSP1P33241 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 AC093525.9-201ENST00000624961 1746 ntBASIC17.54■□□□□ 0.4
LSP1P33241 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LSP1P33241 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LSP1P33241 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.54■□□□□ 0.4
LSP1P33241 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LSP1P33241 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSP1P33241 LINC02228-204ENST00000642115 2962 ntBASIC17.53■□□□□ 0.4
LSP1P33241 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSP1P33241 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.53■□□□□ 0.4
LSP1P33241 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.53■□□□□ 0.4
LSP1P33241 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.53■□□□□ 0.4
LSP1P33241 AC083880.1-201ENST00000608266 535 ntBASIC17.53■□□□□ 0.4
LSP1P33241 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSP1P33241 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSP1P33241 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
LSP1P33241 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSP1P33241 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.52■□□□□ 0.4
LSP1P33241 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LSP1P33241 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.52■□□□□ 0.4
LSP1P33241 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.52■□□□□ 0.4
LSP1P33241 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.52■□□□□ 0.4
LSP1P33241 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LSP1P33241 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSP1P33241 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LSP1P33241 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.52■□□□□ 0.39
LSP1P33241 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSP1P33241 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSP1P33241 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LSP1P33241 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LSP1P33241 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.52■□□□□ 0.39
LSP1P33241 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
LSP1P33241 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
LSP1P33241 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSP1P33241 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.51■□□□□ 0.39
LSP1P33241 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LSP1P33241 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LSP1P33241 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 AC005104.2-201ENST00000427818 678 ntBASIC17.51■□□□□ 0.39
LSP1P33241 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LSP1P33241 RPS2P4-201ENST00000476944 856 ntBASIC17.51■□□□□ 0.39
LSP1P33241 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LSP1P33241 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 MTDHP1-201ENST00000605323 784 ntBASIC17.51■□□□□ 0.39
LSP1P33241 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.51■□□□□ 0.39
LSP1P33241 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSP1P33241 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms