Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.79■□□□□ 0.92
NCLP19338 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.79■□□□□ 0.92
NCLP19338 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NCLP19338 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NCLP19338 AC117947.1-201ENST00000427448 529 ntBASIC20.79■□□□□ 0.92
NCLP19338 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.79■□□□□ 0.92
NCLP19338 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
NCLP19338 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.79■□□□□ 0.92
NCLP19338 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.79■□□□□ 0.92
NCLP19338 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCLP19338 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NCLP19338 AK4P3-201ENST00000418260 669 ntBASIC20.78■□□□□ 0.92
NCLP19338 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.78■□□□□ 0.92
NCLP19338 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.78■□□□□ 0.92
NCLP19338 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 NTF6B-201ENST00000591913 560 ntBASIC20.78■□□□□ 0.92
NCLP19338 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 AC106886.4-201ENST00000623557 2502 ntBASIC20.78■□□□□ 0.92
NCLP19338 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
NCLP19338 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCLP19338 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
NCLP19338 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
NCLP19338 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.77■□□□□ 0.92
NCLP19338 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
NCLP19338 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
NCLP19338 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.77■□□□□ 0.92
NCLP19338 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.77■□□□□ 0.92
NCLP19338 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NCLP19338 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.77■□□□□ 0.92
NCLP19338 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.77■□□□□ 0.92
NCLP19338 AL512604.3-201ENST00000569583 964 ntBASIC20.77■□□□□ 0.92
NCLP19338 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 AC141257.4-201ENST00000634557 245 ntBASIC20.77■□□□□ 0.92
NCLP19338 AC136944.6-201ENST00000634818 245 ntBASIC20.77■□□□□ 0.92
NCLP19338 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 CICP6-201ENST00000457191 2729 ntBASIC20.77■□□□□ 0.92
NCLP19338 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NCLP19338 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCLP19338 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NCLP19338 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms