Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM228BP0C875 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.6■□□□□ 0.57
FAM228BP0C875 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM228BP0C875 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM228BP0C875 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
FAM228BP0C875 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM228BP0C875 RNF216P1-203ENST00000404404 2427 ntBASIC18.6■□□□□ 0.57
FAM228BP0C875 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FAM228BP0C875 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FAM228BP0C875 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.59■□□□□ 0.57
FAM228BP0C875 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.59■□□□□ 0.57
FAM228BP0C875 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.59■□□□□ 0.57
FAM228BP0C875 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.59■□□□□ 0.57
FAM228BP0C875 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.59■□□□□ 0.57
FAM228BP0C875 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 AC122714.2-201ENST00000502787 707 ntBASIC18.59■□□□□ 0.57
FAM228BP0C875 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
FAM228BP0C875 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.59■□□□□ 0.57
FAM228BP0C875 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.59■□□□□ 0.57
FAM228BP0C875 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.59■□□□□ 0.57
FAM228BP0C875 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.59■□□□□ 0.57
FAM228BP0C875 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.59■□□□□ 0.57
FAM228BP0C875 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.59■□□□□ 0.57
FAM228BP0C875 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.59■□□□□ 0.57
FAM228BP0C875 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
FAM228BP0C875 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 AC092068.3-201ENST00000587894 2016 ntBASIC18.59■□□□□ 0.57
FAM228BP0C875 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.59■□□□□ 0.57
FAM228BP0C875 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.59■□□□□ 0.57
FAM228BP0C875 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM228BP0C875 PCDHB19P-201ENST00000570871 2371 ntBASIC18.59■□□□□ 0.57
FAM228BP0C875 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FAM228BP0C875 KRT8P10-201ENST00000450021 1447 ntBASIC18.58■□□□□ 0.57
FAM228BP0C875 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FAM228BP0C875 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FAM228BP0C875 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FAM228BP0C875 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.58■□□□□ 0.57
FAM228BP0C875 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FAM228BP0C875 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FAM228BP0C875 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FAM228BP0C875 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.58■□□□□ 0.56
FAM228BP0C875 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 DUX4L26-201ENST00000489078 1255 ntBASIC18.58■□□□□ 0.56
FAM228BP0C875 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.58■□□□□ 0.56
FAM228BP0C875 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 RN7SL850P-201ENST00000579959 291 ntBASIC18.58■□□□□ 0.56
FAM228BP0C875 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.58■□□□□ 0.56
FAM228BP0C875 AC011498.5-201ENST00000592027 486 ntBASIC18.58■□□□□ 0.56
FAM228BP0C875 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms