Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM2P07951 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TPM2P07951 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TPM2P07951 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
TPM2P07951 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM2P07951 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.9■□□□□ 0.78
TPM2P07951 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.9■□□□□ 0.78
TPM2P07951 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.9■□□□□ 0.78
TPM2P07951 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM2P07951 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 FITM1-202ENST00000559294 800 ntBASIC19.9■□□□□ 0.78
TPM2P07951 AP000525.1-201ENST00000608286 694 ntBASIC19.9■□□□□ 0.78
TPM2P07951 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
TPM2P07951 AC010653.2-201ENST00000623505 997 ntBASIC19.9■□□□□ 0.78
TPM2P07951 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TPM2P07951 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TPM2P07951 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM2P07951 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM2P07951 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM2P07951 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TPM2P07951 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TPM2P07951 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM2P07951 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM2P07951 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM2P07951 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TPM2P07951 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TPM2P07951 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM2P07951 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM2P07951 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM2P07951 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM2P07951 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM2P07951 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TPM2P07951 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM2P07951 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM2P07951 AC024909.3-201ENST00000611513 2257 ntBASIC19.88■□□□□ 0.77
TPM2P07951 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM2P07951 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM2P07951 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.88■□□□□ 0.77
TPM2P07951 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.88■□□□□ 0.77
TPM2P07951 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.88■□□□□ 0.77
TPM2P07951 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TPM2P07951 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TPM2P07951 MIR1238-201ENST00000408483 83 ntBASIC19.88■□□□□ 0.77
TPM2P07951 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.88■□□□□ 0.77
TPM2P07951 AC007663.1-201ENST00000438948 1240 ntBASIC19.88■□□□□ 0.77
TPM2P07951 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 AC128688.1-201ENST00000487626 519 ntBASIC19.88■□□□□ 0.77
TPM2P07951 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.88■□□□□ 0.77
TPM2P07951 AC010240.3-201ENST00000607688 395 ntBASIC19.88■□□□□ 0.77
TPM2P07951 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TPM2P07951 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TPM2P07951 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 AL024508.2-201ENST00000607749 1894 ntBASIC19.88■□□□□ 0.77
TPM2P07951 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM2P07951 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms