Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 AC024243.1-201ENST00000609234 778 ntBASIC14.68□□□□□ -0.06
CD74P04233 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.68□□□□□ -0.06
CD74P04233 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.68□□□□□ -0.06
CD74P04233 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD74P04233 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.67□□□□□ -0.06
CD74P04233 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CD74P04233 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 AC007663.1-201ENST00000438948 1240 ntBASIC14.67□□□□□ -0.06
CD74P04233 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.67□□□□□ -0.06
CD74P04233 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CD74P04233 AC092865.7-201ENST00000641832 219 ntBASIC14.67□□□□□ -0.06
CD74P04233 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CD74P04233 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.67□□□□□ -0.06
CD74P04233 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CD74P04233 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
CD74P04233 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.66□□□□□ -0.06
CD74P04233 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 OR6D1P-203ENST00000641209 4860 ntBASIC14.66□□□□□ -0.06
CD74P04233 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms