Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PI4KAP1-204ENST00000612579 1703 ntBASIC19.07■□□□□ 0.64
VTNP04004 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTNP04004 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.07■□□□□ 0.64
VTNP04004 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.06■□□□□ 0.64
VTNP04004 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VTNP04004 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.06■□□□□ 0.64
VTNP04004 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.06■□□□□ 0.64
VTNP04004 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.06■□□□□ 0.64
VTNP04004 MIR3687-2-201ENST00000577708 61 ntBASIC19.06■□□□□ 0.64
VTNP04004 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.06■□□□□ 0.64
VTNP04004 MIR3687-1-201ENST00000614492 61 ntBASIC19.06■□□□□ 0.64
VTNP04004 AC010654.1-201ENST00000615722 808 ntBASIC19.06■□□□□ 0.64
VTNP04004 AL513190.1-201ENST00000621254 727 ntBASIC19.06■□□□□ 0.64
VTNP04004 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
VTNP04004 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VTNP04004 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VTNP04004 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.05■□□□□ 0.64
VTNP04004 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VTNP04004 LYSMD4-203ENST00000378904 2122 ntBASIC19.05■□□□□ 0.64
VTNP04004 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.05■□□□□ 0.64
VTNP04004 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.05■□□□□ 0.64
VTNP04004 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.05■□□□□ 0.64
VTNP04004 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.05■□□□□ 0.64
VTNP04004 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.05■□□□□ 0.64
VTNP04004 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.05■□□□□ 0.64
VTNP04004 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
VTNP04004 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VTNP04004 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.04■□□□□ 0.64
VTNP04004 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.04■□□□□ 0.64
VTNP04004 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
VTNP04004 MTDHP5-201ENST00000598980 586 ntBASIC19.04■□□□□ 0.64
VTNP04004 GGTLC5P-201ENST00000617623 998 ntBASIC19.04■□□□□ 0.64
VTNP04004 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VTNP04004 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VTNP04004 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.03■□□□□ 0.64
VTNP04004 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms