Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC3P02656 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC3P02656 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC3P02656 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.02□□□□□ -0.17
APOC3P02656 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC3P02656 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.01□□□□□ -0.17
APOC3P02656 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 TSPY13P-201ENST00000338964 914 ntBASIC14.01□□□□□ -0.17
APOC3P02656 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.01□□□□□ -0.17
APOC3P02656 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 AP001160.3-201ENST00000601484 763 ntBASIC14.01□□□□□ -0.17
APOC3P02656 AC233992.3-201ENST00000607491 485 ntBASIC14.01□□□□□ -0.17
APOC3P02656 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 AC092437.1-201ENST00000624794 1048 ntBASIC14.01□□□□□ -0.17
APOC3P02656 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.01□□□□□ -0.17
APOC3P02656 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.01□□□□□ -0.17
APOC3P02656 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APOC3P02656 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOC3P02656 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14□□□□□ -0.17
APOC3P02656 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
APOC3P02656 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14□□□□□ -0.17
APOC3P02656 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14□□□□□ -0.17
APOC3P02656 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
APOC3P02656 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14□□□□□ -0.17
APOC3P02656 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14□□□□□ -0.17
APOC3P02656 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14□□□□□ -0.17
APOC3P02656 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14□□□□□ -0.17
APOC3P02656 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14□□□□□ -0.17
APOC3P02656 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14□□□□□ -0.17
APOC3P02656 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14□□□□□ -0.17
APOC3P02656 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
APOC3P02656 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14□□□□□ -0.17
APOC3P02656 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
APOC3P02656 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms