Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
COL1A1P02452 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.83■□□□□ 0.93
COL1A1P02452 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
COL1A1P02452 AL031432.2-201ENST00000566714 459 ntBASIC20.83■□□□□ 0.93
COL1A1P02452 AL928711.1-201ENST00000570165 459 ntBASIC20.83■□□□□ 0.93
COL1A1P02452 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.83■□□□□ 0.93
COL1A1P02452 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A1P02452 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.83■□□□□ 0.93
COL1A1P02452 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A1P02452 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A1P02452 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.83■□□□□ 0.92
COL1A1P02452 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.83■□□□□ 0.92
COL1A1P02452 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A1P02452 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.82■□□□□ 0.92
COL1A1P02452 ADH5P3-201ENST00000433842 1137 ntBASIC20.82■□□□□ 0.92
COL1A1P02452 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.82■□□□□ 0.92
COL1A1P02452 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.82■□□□□ 0.92
COL1A1P02452 SPCS2P1-201ENST00000561636 679 ntBASIC20.82■□□□□ 0.92
COL1A1P02452 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.82■□□□□ 0.92
COL1A1P02452 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.82■□□□□ 0.92
COL1A1P02452 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COL1A1P02452 AC025580.3-201ENST00000617932 1424 ntBASIC20.82■□□□□ 0.92
COL1A1P02452 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL1A1P02452 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL1A1P02452 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL1A1P02452 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL1A1P02452 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.81■□□□□ 0.92
COL1A1P02452 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A1P02452 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL1A1P02452 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.81■□□□□ 0.92
COL1A1P02452 AC091812.2-201ENST00000619081 385 ntBASIC20.81■□□□□ 0.92
COL1A1P02452 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.81■□□□□ 0.92
COL1A1P02452 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A1P02452 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.81■□□□□ 0.92
COL1A1P02452 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
COL1A1P02452 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.81■□□□□ 0.92
COL1A1P02452 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.81■□□□□ 0.92
COL1A1P02452 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.81■□□□□ 0.92
COL1A1P02452 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL1A1P02452 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
COL1A1P02452 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COL1A1P02452 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.8■□□□□ 0.92
COL1A1P02452 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.8■□□□□ 0.92
COL1A1P02452 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.8■□□□□ 0.92
COL1A1P02452 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 MIR770-201ENST00000390219 98 ntBASIC20.8■□□□□ 0.92
COL1A1P02452 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.8■□□□□ 0.92
COL1A1P02452 FAM58CP-201ENST00000435741 640 ntBASIC20.8■□□□□ 0.92
COL1A1P02452 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.8■□□□□ 0.92
COL1A1P02452 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 AC106028.4-201ENST00000614509 607 ntBASIC20.8■□□□□ 0.92
COL1A1P02452 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.8■□□□□ 0.92
COL1A1P02452 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
COL1A1P02452 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.8■□□□□ 0.92
COL1A1P02452 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL1A1P02452 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A1P02452 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A1P02452 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL1A1P02452 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A1P02452 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
COL1A1P02452 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL1A1P02452 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL1A1P02452 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms