Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GSC2O15499 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GSC2O15499 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.81■□□□□ 0.28
GSC2O15499 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.81■□□□□ 0.28
GSC2O15499 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GSC2O15499 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GSC2O15499 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
GSC2O15499 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GSC2O15499 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GSC2O15499 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.8■□□□□ 0.28
GSC2O15499 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.8■□□□□ 0.28
GSC2O15499 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 AL139327.4-201ENST00000612362 153 ntBASIC16.8■□□□□ 0.28
GSC2O15499 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.8■□□□□ 0.28
GSC2O15499 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.8■□□□□ 0.28
GSC2O15499 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GSC2O15499 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GSC2O15499 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.79■□□□□ 0.28
GSC2O15499 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.79■□□□□ 0.28
GSC2O15499 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.79■□□□□ 0.28
GSC2O15499 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.79■□□□□ 0.28
GSC2O15499 AC124016.1-201ENST00000609552 612 ntBASIC16.79■□□□□ 0.28
GSC2O15499 AC110285.5-201ENST00000611501 352 ntBASIC16.79■□□□□ 0.28
GSC2O15499 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
GSC2O15499 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GSC2O15499 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GSC2O15499 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GSC2O15499 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.78■□□□□ 0.28
GSC2O15499 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GSC2O15499 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.78■□□□□ 0.28
GSC2O15499 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GSC2O15499 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GSC2O15499 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GSC2O15499 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms