Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SEMA3EO15041 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SEMA3EO15041 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.9■□□□□ 0.94
SEMA3EO15041 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.9■□□□□ 0.94
SEMA3EO15041 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SEMA3EO15041 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.9■□□□□ 0.94
SEMA3EO15041 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.9■□□□□ 0.94
SEMA3EO15041 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.9■□□□□ 0.94
SEMA3EO15041 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SEMA3EO15041 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.9■□□□□ 0.94
SEMA3EO15041 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.9■□□□□ 0.94
SEMA3EO15041 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3EO15041 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3EO15041 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3EO15041 NOC2LP1-202ENST00000452600 2235 ntBASIC20.89■□□□□ 0.94
SEMA3EO15041 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.89■□□□□ 0.94
SEMA3EO15041 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3EO15041 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.89■□□□□ 0.94
SEMA3EO15041 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.89■□□□□ 0.93
SEMA3EO15041 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.89■□□□□ 0.93
SEMA3EO15041 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.89■□□□□ 0.93
SEMA3EO15041 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3EO15041 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3EO15041 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SEMA3EO15041 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3EO15041 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3EO15041 AL513190.1-201ENST00000621254 727 ntBASIC20.89■□□□□ 0.93
SEMA3EO15041 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3EO15041 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SEMA3EO15041 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.88■□□□□ 0.93
SEMA3EO15041 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SEMA3EO15041 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.88■□□□□ 0.93
SEMA3EO15041 CXCL1P1-201ENST00000502804 216 ntBASIC20.88■□□□□ 0.93
SEMA3EO15041 PDPK2P-202ENST00000562415 1191 ntBASIC20.88■□□□□ 0.93
SEMA3EO15041 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 AL691403.2-201ENST00000618460 490 ntBASIC20.88■□□□□ 0.93
SEMA3EO15041 AC004877.2-201ENST00000623941 599 ntBASIC20.88■□□□□ 0.93
SEMA3EO15041 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SEMA3EO15041 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SEMA3EO15041 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3EO15041 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SEMA3EO15041 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
SEMA3EO15041 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SEMA3EO15041 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SEMA3EO15041 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.87■□□□□ 0.93
SEMA3EO15041 FAM185BP-201ENST00000443595 716 ntBASIC20.87■□□□□ 0.93
SEMA3EO15041 AC087163.2-201ENST00000457299 853 ntBASIC20.87■□□□□ 0.93
SEMA3EO15041 YBX1P5-201ENST00000509441 847 ntBASIC20.87■□□□□ 0.93
SEMA3EO15041 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SEMA3EO15041 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.87■□□□□ 0.93
SEMA3EO15041 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.87■□□□□ 0.93
SEMA3EO15041 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.87■□□□□ 0.93
SEMA3EO15041 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 C20orf181-201ENST00000623918 480 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms