Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 AC116353.5-201ENST00000638148 1699 ntBASIC15□□□□□ -0.01
MEIS3P1A6NDR6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15□□□□□ -0.01
MEIS3P1A6NDR6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 AC046185.3-201ENST00000623228 1824 ntBASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.99□□□□□ -0.01
MEIS3P1A6NDR6 KRT8P47-201ENST00000604727 1398 ntBASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MEIS3P1A6NDR6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms