Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 HLA-A-201ENST00000376802 1334 ntBASIC20.53■□□□□ 0.88
PTPDC1A2A3K4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 AC011467.2-201ENST00000598425 242 ntBASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTPDC1A2A3K4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTPDC1A2A3K4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.52■□□□□ 0.87
PTPDC1A2A3K4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 AC064862.7-201ENST00000604520 867 ntBASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPDC1A2A3K4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AL022342.1-201ENST00000400363 863 ntBASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AC002558.1-201ENST00000488906 803 ntBASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 MTDHP3-201ENST00000594186 672 ntBASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 AP001269.4-201ENST00000609611 512 ntBASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPDC1A2A3K4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPDC1A2A3K4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPDC1A2A3K4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPDC1A2A3K4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms