Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV9S1A1TA0A576 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 RNF216P1-203ENST00000404404 2427 ntBASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 MYCLP1-201ENST00000372451 1075 ntBASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 TSPY5P-201ENST00000426936 936 ntBASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 AC112907.2-201ENST00000448639 330 ntBASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV9S1A1TA0A576 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 AC007967.3-201ENST00000434308 558 ntBASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 HOMER2P1-201ENST00000455653 964 ntBASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 AC133561.5-201ENST00000635547 218 ntBASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 AC097493.4-201ENST00000641197 219 ntBASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 RNF152P1-201ENST00000397754 604 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 IGHV3-52-201ENST00000519770 353 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 AC109462.3-201ENST00000573934 613 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 AC092068.3-201ENST00000587894 2016 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms