Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
SATB2Q9UPW6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 MIR3687-2-201ENST00000577708 61 ntBASIC17.12■□□□□ 0.33
SATB2Q9UPW6 MTDHP4-201ENST00000600287 670 ntBASIC17.12■□□□□ 0.33
SATB2Q9UPW6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 MIR3687-1-201ENST00000614492 61 ntBASIC17.12■□□□□ 0.33
SATB2Q9UPW6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SATB2Q9UPW6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 YBX2P1-201ENST00000394192 760 ntBASIC17.11■□□□□ 0.33
SATB2Q9UPW6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.11■□□□□ 0.33
SATB2Q9UPW6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 AC040169.1-201ENST00000565382 521 ntBASIC17.11■□□□□ 0.33
SATB2Q9UPW6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 NKAPP1-205ENST00000585790 367 ntBASIC17.11■□□□□ 0.33
SATB2Q9UPW6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 AC141586.5-201ENST00000624546 2050 ntBASIC17.11■□□□□ 0.33
SATB2Q9UPW6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SATB2Q9UPW6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AL513477.1-201ENST00000602865 2407 ntBASIC17.1■□□□□ 0.33
SATB2Q9UPW6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 KRT18P65-201ENST00000439811 1286 ntBASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
SATB2Q9UPW6 AC105339.3-201ENST00000560043 636 ntBASIC17.1■□□□□ 0.33
SATB2Q9UPW6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms