Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 PMS2P2-201ENST00000425039 1128 ntBASIC20■□□□□ 0.79
FBXO28Q9NVF7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 PDPK2P-202ENST00000562415 1191 ntBASIC20■□□□□ 0.79
FBXO28Q9NVF7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 AC079781.4-201ENST00000641908 219 ntBASIC20■□□□□ 0.79
FBXO28Q9NVF7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 LINC00304-203ENST00000565008 1864 ntBASIC20■□□□□ 0.79
FBXO28Q9NVF7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FBXO28Q9NVF7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FBXO28Q9NVF7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 AL031432.2-201ENST00000566714 459 ntBASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 AL928711.1-201ENST00000570165 459 ntBASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 LINC01451-201ENST00000623792 534 ntBASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
FBXO28Q9NVF7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.96■□□□□ 0.79
FBXO28Q9NVF7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO28Q9NVF7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO28Q9NVF7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FBXO28Q9NVF7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms