Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 AL662844.4-201ENST00000606367 2838 ntBASIC19.52■□□□□ 0.72
CBX8Q9HC52 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 CYP2D8P-201ENST00000433633 1490 ntBASIC19.52■□□□□ 0.72
CBX8Q9HC52 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CBX8Q9HC52 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CBX8Q9HC52 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CBX8Q9HC52 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CBX8Q9HC52 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 FAM87A-204ENST00000613235 858 ntBASIC19.51■□□□□ 0.71
CBX8Q9HC52 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CBX8Q9HC52 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CBX8Q9HC52 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.5■□□□□ 0.71
CBX8Q9HC52 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 KRT8P9-201ENST00000558927 1449 ntBASIC19.5■□□□□ 0.71
CBX8Q9HC52 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CBX8Q9HC52 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 TSPY12P-201ENST00000421279 868 ntBASIC19.49■□□□□ 0.71
CBX8Q9HC52 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 AC079602.3-201ENST00000623931 403 ntBASIC19.49■□□□□ 0.71
CBX8Q9HC52 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CBX8Q9HC52 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CBX8Q9HC52 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms