Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PIF1Q9H611 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.72■□□□□ 0.27
PIF1Q9H611 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
PIF1Q9H611 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PIF1Q9H611 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 HMGA1P5-201ENST00000412453 271 ntBASIC16.72■□□□□ 0.27
PIF1Q9H611 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.72■□□□□ 0.27
PIF1Q9H611 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.72■□□□□ 0.27
PIF1Q9H611 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.72■□□□□ 0.27
PIF1Q9H611 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 AC008687.5-201ENST00000593746 558 ntBASIC16.72■□□□□ 0.27
PIF1Q9H611 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.72■□□□□ 0.27
PIF1Q9H611 AC097493.4-201ENST00000641197 219 ntBASIC16.72■□□□□ 0.27
PIF1Q9H611 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 LINC01568-207ENST00000641790 1380 ntBASIC16.72■□□□□ 0.27
PIF1Q9H611 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PIF1Q9H611 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PIF1Q9H611 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PIF1Q9H611 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 KRT8P9-201ENST00000558927 1449 ntBASIC16.71■□□□□ 0.27
PIF1Q9H611 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 LYSMD4-203ENST00000378904 2122 ntBASIC16.71■□□□□ 0.27
PIF1Q9H611 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.71■□□□□ 0.27
PIF1Q9H611 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 PVRIG2P-201ENST00000435460 978 ntBASIC16.71■□□□□ 0.27
PIF1Q9H611 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PIF1Q9H611 AC012306.2-201ENST00000609350 630 ntBASIC16.71■□□□□ 0.27
PIF1Q9H611 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.71■□□□□ 0.27
PIF1Q9H611 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PIF1Q9H611 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
PIF1Q9H611 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PIF1Q9H611 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.71■□□□□ 0.26
PIF1Q9H611 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PIF1Q9H611 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 AC005915.1-201ENST00000624912 2018 ntBASIC16.7■□□□□ 0.26
PIF1Q9H611 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms