Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX6-2Q9C056 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AP000593.1-201ENST00000393668 712 ntBASIC14.18□□□□□ -0.14
NKX6-2Q9C056 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 HLA-A-209ENST00000638375 975 ntBASIC14.18□□□□□ -0.14
NKX6-2Q9C056 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX6-2Q9C056 GMCL1P1-201ENST00000463439 1581 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 TNRC18P2-201ENST00000417666 2714 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 KRT8P41-201ENST00000533985 1514 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 PRSS44-201ENST00000515154 1146 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 HLA-B-256ENST00000639848 1089 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms