Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC009948.4-201ENST00000604692 675 ntBASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC009154.2-201ENST00000621177 724 ntBASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AC010947.1-201ENST00000623454 693 ntBASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
KRTAP3-1Q9BYR8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AP000568.1-201ENST00000282964 442 ntBASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 TSPY15P-201ENST00000457163 923 ntBASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AL355075.4-201ENST00000554988 638 ntBASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
KRTAP3-1Q9BYR8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms