Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC005336.2-201ENST00000593183 939 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 BNIP3P18-201ENST00000593976 575 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AL591684.3-201ENST00000605187 298 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AL353801.3-201ENST00000609898 542 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.69□□□□□ -0.06
PCGF1Q9BSM1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.68□□□□□ -0.06
PCGF1Q9BSM1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms