Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 NKAPP1-205ENST00000585790 367 ntBASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 AL139288.1-201ENST00000623748 933 ntBASIC14.51□□□□□ -0.09
GAFA1Q96PS6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 AL023806.1-201ENST00000603994 1649 ntBASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GAFA1Q96PS6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 AL135999.2-201ENST00000622438 1686 ntBASIC14.5□□□□□ -0.09
GAFA1Q96PS6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 SART3-203ENST00000546611 1184 ntBASIC14.5□□□□□ -0.09
GAFA1Q96PS6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 RN7SL510P-201ENST00000581311 263 ntBASIC14.5□□□□□ -0.09
GAFA1Q96PS6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 AC004817.3-201ENST00000602957 2129 ntBASIC14.5□□□□□ -0.09
GAFA1Q96PS6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.5□□□□□ -0.09
GAFA1Q96PS6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 FZD10-202ENST00000539839 3282 ntBASIC14.49□□□□□ -0.09
GAFA1Q96PS6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms