Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 AL589182.2-201ENST00000619332 1049 ntBASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP6V0A1Q93050 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 YBX2P1-201ENST00000394192 760 ntBASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP6V0A1Q93050 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
ATP6V0A1Q93050 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V0A1Q93050 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V0A1Q93050 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V0A1Q93050 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP6V0A1Q93050 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 RPSAP43-201ENST00000402237 625 ntBASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 GPX1P2-201ENST00000429271 606 ntBASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AC108751.1-201ENST00000490852 363 ntBASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 NCF1C-201ENST00000438382 1427 ntBASIC19.51■□□□□ 0.71
ATP6V0A1Q93050 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 DNAJB3-201ENST00000446806 729 ntBASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 MIR3687-2-201ENST00000577708 61 ntBASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 AL139327.4-201ENST00000612362 153 ntBASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 MIR3687-1-201ENST00000614492 61 ntBASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms