Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMIM4Q8WVI0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 AC026366.1-201ENST00000488803 879 ntBASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 SLC25A1P4-201ENST00000567977 778 ntBASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMIM4Q8WVI0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SMIM4Q8WVI0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 KRT18P29-201ENST00000397031 1267 ntBASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 AC124947.2-201ENST00000547118 1133 ntBASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 AF186192.3-201ENST00000583427 947 ntBASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SMIM4Q8WVI0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.94□□□□□ -0.02
SMIM4Q8WVI0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms