Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHDHQ8NE62 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHDHQ8NE62 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHDHQ8NE62 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.6■□□□□ 0.25
CHDHQ8NE62 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 AC133963.1-201ENST00000504166 1679 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 AC106886.4-201ENST00000623557 2502 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 TSPY12P-201ENST00000421279 868 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 AL671277.2-201ENST00000458060 996 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 AL353692.3-201ENST00000407031 1396 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 KRT8P47-201ENST00000604727 1398 ntBASIC16.59■□□□□ 0.25
CHDHQ8NE62 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
CHDHQ8NE62 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHDHQ8NE62 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHDHQ8NE62 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHDHQ8NE62 AGGF1P2-201ENST00000426656 2106 ntBASIC16.58■□□□□ 0.25
CHDHQ8NE62 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CHDHQ8NE62 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHDHQ8NE62 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 DDX43P3-201ENST00000441064 443 ntBASIC16.58■□□□□ 0.24
CHDHQ8NE62 SPDYE13P-201ENST00000445314 798 ntBASIC16.58■□□□□ 0.24
CHDHQ8NE62 VENTXP5-201ENST00000523979 775 ntBASIC16.58■□□□□ 0.24
CHDHQ8NE62 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHDHQ8NE62 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHDHQ8NE62 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHDHQ8NE62 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.57■□□□□ 0.24
CHDHQ8NE62 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms