Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 ADH5P3-201ENST00000433842 1137 ntBASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 AC025678.2-201ENST00000562061 970 ntBASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS4Q8IUM7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 AC138028.4-201ENST00000564984 1845 ntBASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 SPCS2P1-201ENST00000561636 679 ntBASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NPAS4Q8IUM7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.58■□□□□ 0.57
NPAS4Q8IUM7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NPAS4Q8IUM7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS4Q8IUM7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms