Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 AL590787.1-201ENST00000568856 1315 ntBASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBE3BQ7Z3V4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 AC023274.1-201ENST00000418278 595 ntBASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBE3BQ7Z3V4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBE3BQ7Z3V4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBE3BQ7Z3V4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
UBE3BQ7Z3V4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
UBE3BQ7Z3V4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 AP002414.1-201ENST00000391405 1147 ntBASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 CRYGEP-201ENST00000412192 528 ntBASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 VN2R19P-201ENST00000442399 1052 ntBASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 AC040169.1-201ENST00000565382 521 ntBASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.7■■□□□ 1.06
UBE3BQ7Z3V4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 AC018470.1-201ENST00000624790 3129 ntBASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 AC133963.1-201ENST00000504166 1679 ntBASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBE3BQ7Z3V4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
UBE3BQ7Z3V4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms