Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 CRYGEP-201ENST00000412192 528 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 BX842568.4-201ENST00000421222 227 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 PRSS29P-201ENST00000440800 595 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 AC092865.5-201ENST00000545435 363 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 AC004790.2-201ENST00000623588 572 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 RNF165-205ENST00000588679 2904 ntBASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC27A1Q6PCB7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC27A1Q6PCB7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 AC040169.1-201ENST00000565382 521 ntBASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 AC006538.3-201ENST00000612495 578 ntBASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC27A1Q6PCB7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 MRPL20P1-201ENST00000400819 433 ntBASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 VN2R19P-201ENST00000442399 1052 ntBASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 GPALPP1-207ENST00000611650 899 ntBASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC27A1Q6PCB7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC27A1Q6PCB7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms