Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 NCF1C-201ENST00000438382 1427 ntBASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 AC009336.1-201ENST00000608941 1553 ntBASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 FAM197Y3-203ENST00000618346 717 ntBASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3CQ6NXT2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 AL591424.1-201ENST00000442569 1213 ntBASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 AC136632.2-201ENST00000512891 861 ntBASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 MIR1199-201ENST00000621445 119 ntBASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
H3F3CQ6NXT2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 TERC-201ENST00000602385 541 ntBASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 AC027601.4-201ENST00000611259 610 ntBASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PMS2P7-201ENST00000506558 1336 ntBASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H3F3CQ6NXT2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.12■□□□□ 0.17
H3F3CQ6NXT2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H3F3CQ6NXT2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms