Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNB3P54284 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNB3P54284 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNB3P54284 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 TSEN15P1-201ENST00000423257 515 ntBASIC20.58■□□□□ 0.89
CACNB3P54284 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNB3P54284 FAM185BP-201ENST00000443595 716 ntBASIC20.58■□□□□ 0.89
CACNB3P54284 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNB3P54284 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNB3P54284 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 AC068137.2-201ENST00000605408 478 ntBASIC20.58■□□□□ 0.89
CACNB3P54284 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.58■□□□□ 0.89
CACNB3P54284 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNB3P54284 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNB3P54284 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB3P54284 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.58■□□□□ 0.88
CACNB3P54284 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.58■□□□□ 0.88
CACNB3P54284 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB3P54284 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.58■□□□□ 0.88
CACNB3P54284 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CACNB3P54284 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.58■□□□□ 0.88
CACNB3P54284 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CACNB3P54284 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CACNB3P54284 AC004461.1-201ENST00000412461 403 ntBASIC20.57■□□□□ 0.88
CACNB3P54284 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CACNB3P54284 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNB3P54284 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNB3P54284 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNB3P54284 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.57■□□□□ 0.88
CACNB3P54284 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CACNB3P54284 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.57■□□□□ 0.88
CACNB3P54284 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.57■□□□□ 0.88
CACNB3P54284 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNB3P54284 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.57■□□□□ 0.88
CACNB3P54284 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNB3P54284 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNB3P54284 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CACNB3P54284 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.56■□□□□ 0.88
CACNB3P54284 AL513480.1-201ENST00000451731 511 ntBASIC20.56■□□□□ 0.88
CACNB3P54284 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 AP000344.2-201ENST00000512987 629 ntBASIC20.56■□□□□ 0.88
CACNB3P54284 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.56■□□□□ 0.88
CACNB3P54284 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.56■□□□□ 0.88
CACNB3P54284 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 AL513210.1-201ENST00000629608 234 ntBASIC20.56■□□□□ 0.88
CACNB3P54284 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CACNB3P54284 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNB3P54284 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms