Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.97■□□□□ 0.31
PDX1P52945 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.97■□□□□ 0.31
PDX1P52945 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.97■□□□□ 0.31
PDX1P52945 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDX1P52945 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDX1P52945 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDX1P52945 AC008764.6-201ENST00000595909 2069 ntBASIC16.97■□□□□ 0.31
PDX1P52945 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDX1P52945 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PDX1P52945 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDX1P52945 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 PMS2P2-201ENST00000425039 1128 ntBASIC16.96■□□□□ 0.31
PDX1P52945 PRYP5-201ENST00000451909 266 ntBASIC16.96■□□□□ 0.31
PDX1P52945 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 AC108751.1-201ENST00000490852 363 ntBASIC16.96■□□□□ 0.31
PDX1P52945 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.96■□□□□ 0.31
PDX1P52945 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.96■□□□□ 0.31
PDX1P52945 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.96■□□□□ 0.31
PDX1P52945 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.96■□□□□ 0.31
PDX1P52945 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
PDX1P52945 MIR1199-201ENST00000621445 119 ntBASIC16.96■□□□□ 0.31
PDX1P52945 AC134684.3-201ENST00000641758 218 ntBASIC16.96■□□□□ 0.31
PDX1P52945 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDX1P52945 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.96■□□□□ 0.31
PDX1P52945 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDX1P52945 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.96■□□□□ 0.3
PDX1P52945 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDX1P52945 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PDX1P52945 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDX1P52945 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.95■□□□□ 0.3
PDX1P52945 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDX1P52945 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.95■□□□□ 0.3
PDX1P52945 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 AC067852.2-201ENST00000590513 2313 ntBASIC16.95■□□□□ 0.3
PDX1P52945 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 RPS8P6-201ENST00000426177 609 ntBASIC16.95■□□□□ 0.3
PDX1P52945 HMGN1P19-201ENST00000436976 333 ntBASIC16.95■□□□□ 0.3
PDX1P52945 AC136632.2-201ENST00000512891 861 ntBASIC16.95■□□□□ 0.3
PDX1P52945 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 MIR3687-2-201ENST00000577708 61 ntBASIC16.95■□□□□ 0.3
PDX1P52945 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.95■□□□□ 0.3
PDX1P52945 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 MIR3687-1-201ENST00000614492 61 ntBASIC16.95■□□□□ 0.3
PDX1P52945 AC073592.5-201ENST00000624854 528 ntBASIC16.95■□□□□ 0.3
PDX1P52945 AC005593.1-201ENST00000624894 515 ntBASIC16.95■□□□□ 0.3
PDX1P52945 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDX1P52945 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDX1P52945 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 PKD1P1-201ENST00000458669 6805 ntBASIC16.95■□□□□ 0.3
PDX1P52945 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDX1P52945 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PDX1P52945 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.94■□□□□ 0.3
PDX1P52945 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDX1P52945 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDX1P52945 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms