Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 SLC25A1P3-201ENST00000395415 828 ntBASIC17.81■□□□□ 0.44
PTPN3P26045 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN3P26045 POM121L3P-201ENST00000419331 1163 ntBASIC17.81■□□□□ 0.44
PTPN3P26045 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN3P26045 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 UPK3BP1-201ENST00000428678 509 ntBASIC17.81■□□□□ 0.44
PTPN3P26045 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPN3P26045 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN3P26045 AC099336.1-202ENST00000602961 463 ntBASIC17.81■□□□□ 0.44
PTPN3P26045 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN3P26045 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN3P26045 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN3P26045 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN3P26045 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPN3P26045 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PTPN3P26045 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN3P26045 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN3P26045 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PTPN3P26045 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN3P26045 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN3P26045 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN3P26045 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN3P26045 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN3P26045 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN3P26045 AC009336.1-201ENST00000608941 1553 ntBASIC17.79■□□□□ 0.44
PTPN3P26045 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN3P26045 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PTPN3P26045 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.79■□□□□ 0.44
PTPN3P26045 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN3P26045 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 AC073592.5-201ENST00000624854 528 ntBASIC17.79■□□□□ 0.44
PTPN3P26045 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN3P26045 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN3P26045 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms