Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 MIR940-201ENST00000401276 94 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 KLF4P1-201ENST00000412782 1185 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 LAGE3P1-201ENST00000425356 484 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 AC098831.1-202ENST00000438821 336 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 STK19B-204ENST00000512515 211 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.76□□□□□ -0.05
COL8A2P25067 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.76□□□□□ -0.05
COL8A2P25067 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.76□□□□□ -0.05
COL8A2P25067 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.76□□□□□ -0.05
COL8A2P25067 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.76□□□□□ -0.05
COL8A2P25067 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.76□□□□□ -0.05
COL8A2P25067 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.76□□□□□ -0.05
COL8A2P25067 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL8A2P25067 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL8A2P25067 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 ZNF259P1-201ENST00000407656 1365 ntBASIC14.75□□□□□ -0.05
COL8A2P25067 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.75□□□□□ -0.05
COL8A2P25067 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL8A2P25067 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.75□□□□□ -0.05
COL8A2P25067 RNA5SP415-201ENST00000517246 115 ntBASIC14.75□□□□□ -0.05
COL8A2P25067 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.75□□□□□ -0.05
COL8A2P25067 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.75□□□□□ -0.05
COL8A2P25067 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL8A2P25067 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
COL8A2P25067 AC104109.2-201ENST00000602919 1418 ntBASIC14.75□□□□□ -0.05
COL8A2P25067 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL8A2P25067 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms