Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NCK1P16333 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.54■□□□□ 0.24
NCK1P16333 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.54■□□□□ 0.24
NCK1P16333 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NCK1P16333 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.54■□□□□ 0.24
NCK1P16333 BX276092.7-203ENST00000637198 1536 ntBASIC16.54■□□□□ 0.24
NCK1P16333 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.54■□□□□ 0.24
NCK1P16333 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCK1P16333 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NCK1P16333 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NCK1P16333 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 AL162727.3-201ENST00000635661 2787 ntBASIC16.53■□□□□ 0.24
NCK1P16333 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NCK1P16333 TSPY7P-201ENST00000431358 1114 ntBASIC16.53■□□□□ 0.24
NCK1P16333 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.53■□□□□ 0.24
NCK1P16333 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.53■□□□□ 0.24
NCK1P16333 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NCK1P16333 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.53■□□□□ 0.24
NCK1P16333 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.53■□□□□ 0.24
NCK1P16333 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 LINC02012-201ENST00000608206 1725 ntBASIC16.53■□□□□ 0.24
NCK1P16333 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.53■□□□□ 0.24
NCK1P16333 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
NCK1P16333 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCK1P16333 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NCK1P16333 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NCK1P16333 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.52■□□□□ 0.24
NCK1P16333 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 TSPY14P-201ENST00000303979 915 ntBASIC16.52■□□□□ 0.24
NCK1P16333 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.52■□□□□ 0.24
NCK1P16333 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.52■□□□□ 0.24
NCK1P16333 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 AC005104.2-201ENST00000427818 678 ntBASIC16.52■□□□□ 0.24
NCK1P16333 GCSHP5-201ENST00000443090 522 ntBASIC16.52■□□□□ 0.24
NCK1P16333 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.52■□□□□ 0.24
NCK1P16333 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.52■□□□□ 0.24
NCK1P16333 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.52■□□□□ 0.24
NCK1P16333 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCK1P16333 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.52■□□□□ 0.24
NCK1P16333 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.52■□□□□ 0.24
NCK1P16333 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCK1P16333 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.52■□□□□ 0.23
NCK1P16333 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCK1P16333 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NCK1P16333 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.52■□□□□ 0.23
NCK1P16333 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.52■□□□□ 0.23
NCK1P16333 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms