Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH1P12830 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH1P12830 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.06■□□□□ 0.32
CDH1P12830 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH1P12830 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDH1P12830 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH1P12830 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH1P12830 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH1P12830 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH1P12830 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH1P12830 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH1P12830 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH1P12830 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH1P12830 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH1P12830 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDH1P12830 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH1P12830 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CDH1P12830 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CDH1P12830 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDH1P12830 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH1P12830 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH1P12830 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH1P12830 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH1P12830 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 COX5BP2-201ENST00000392354 334 ntBASIC17.04■□□□□ 0.32
CDH1P12830 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH1P12830 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 IGHV3-47-201ENST00000425060 335 ntBASIC17.04■□□□□ 0.32
CDH1P12830 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH1P12830 HCG4P8-203ENST00000443049 980 ntBASIC17.04■□□□□ 0.32
CDH1P12830 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.04■□□□□ 0.32
CDH1P12830 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH1P12830 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH1P12830 AC096582.2-201ENST00000510860 516 ntBASIC17.04■□□□□ 0.32
CDH1P12830 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.04■□□□□ 0.32
CDH1P12830 AC012615.1-201ENST00000565797 1299 ntBASIC17.04■□□□□ 0.32
CDH1P12830 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH1P12830 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH1P12830 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH1P12830 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH1P12830 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH1P12830 AC133963.1-201ENST00000504166 1679 ntBASIC17.04■□□□□ 0.32
CDH1P12830 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH1P12830 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH1P12830 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH1P12830 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms