Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL1A1P02452 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.88■□□□□ 0.93
COL1A1P02452 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COL1A1P02452 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A1P02452 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL1A1P02452 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.87■□□□□ 0.93
COL1A1P02452 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.87■□□□□ 0.93
COL1A1P02452 CEND1P1-201ENST00000451006 455 ntBASIC20.87■□□□□ 0.93
COL1A1P02452 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.87■□□□□ 0.93
COL1A1P02452 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL1A1P02452 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 BCAR1-209ENST00000546196 1340 ntBASIC20.86■□□□□ 0.93
COL1A1P02452 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 ACTG1P14-201ENST00000446382 1122 ntBASIC20.86■□□□□ 0.93
COL1A1P02452 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 AC011467.4-201ENST00000594891 528 ntBASIC20.86■□□□□ 0.93
COL1A1P02452 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.86■□□□□ 0.93
COL1A1P02452 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A1P02452 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A1P02452 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.85■□□□□ 0.93
COL1A1P02452 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL1A1P02452 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL1A1P02452 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A1P02452 TSEN15P1-201ENST00000423257 515 ntBASIC20.85■□□□□ 0.93
COL1A1P02452 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A1P02452 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.85■□□□□ 0.93
COL1A1P02452 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A1P02452 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A1P02452 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A1P02452 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL1A1P02452 AC092919.2-201ENST00000623631 1645 ntBASIC20.85■□□□□ 0.93
COL1A1P02452 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A1P02452 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A1P02452 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.84■□□□□ 0.93
COL1A1P02452 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL1A1P02452 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.84■□□□□ 0.93
COL1A1P02452 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.84■□□□□ 0.93
COL1A1P02452 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.84■□□□□ 0.93
COL1A1P02452 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL1A1P02452 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COL1A1P02452 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A1P02452 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL1A1P02452 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.83■□□□□ 0.93
COL1A1P02452 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A1P02452 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A1P02452 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A1P02452 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.83■□□□□ 0.93
COL1A1P02452 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
COL1A1P02452 FAM8A3P-201ENST00000427218 844 ntBASIC20.83■□□□□ 0.93
COL1A1P02452 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A1P02452 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.83■□□□□ 0.93
COL1A1P02452 CXCL1P1-201ENST00000502804 216 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms