Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
NKX2-2O95096 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX2-2O95096 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.11■□□□□ 0.17
NKX2-2O95096 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 AL121772.3-201ENST00000610840 674 ntBASIC16.11■□□□□ 0.17
NKX2-2O95096 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX2-2O95096 AC073592.4-201ENST00000623827 446 ntBASIC16.11■□□□□ 0.17
NKX2-2O95096 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX2-2O95096 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NKX2-2O95096 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NKX2-2O95096 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX2-2O95096 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.11■□□□□ 0.17
NKX2-2O95096 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX2-2O95096 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NKX2-2O95096 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NKX2-2O95096 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 AP005117.1-201ENST00000584346 1413 ntBASIC16.11■□□□□ 0.17
NKX2-2O95096 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NKX2-2O95096 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NKX2-2O95096 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX2-2O95096 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NKX2-2O95096 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX2-2O95096 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.1■□□□□ 0.17
NKX2-2O95096 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.1■□□□□ 0.17
NKX2-2O95096 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 TSPY19P-201ENST00000418461 509 ntBASIC16.1■□□□□ 0.17
NKX2-2O95096 TSPY18P-201ENST00000441642 509 ntBASIC16.1■□□□□ 0.17
NKX2-2O95096 SIGLEC30P-201ENST00000455569 941 ntBASIC16.1■□□□□ 0.17
NKX2-2O95096 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.1■□□□□ 0.17
NKX2-2O95096 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.1■□□□□ 0.17
NKX2-2O95096 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NKX2-2O95096 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.1■□□□□ 0.17
NKX2-2O95096 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 AP001269.4-201ENST00000609611 512 ntBASIC16.1■□□□□ 0.17
NKX2-2O95096 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NKX2-2O95096 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NKX2-2O95096 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NKX2-2O95096 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.09■□□□□ 0.17
NKX2-2O95096 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.09■□□□□ 0.17
NKX2-2O95096 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NKX2-2O95096 AC079776.2-201ENST00000641154 1609 ntBASIC16.09■□□□□ 0.17
NKX2-2O95096 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 LTB4R2-202ENST00000528054 3092 ntBASIC16.09■□□□□ 0.17
NKX2-2O95096 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NKX2-2O95096 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.09■□□□□ 0.17
NKX2-2O95096 KRT18P31-201ENST00000506277 1292 ntBASIC16.09■□□□□ 0.17
NKX2-2O95096 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.09■□□□□ 0.17
NKX2-2O95096 AC106795.1-205ENST00000512851 1056 ntBASIC16.09■□□□□ 0.17
NKX2-2O95096 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.09■□□□□ 0.17
NKX2-2O95096 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.09■□□□□ 0.17
NKX2-2O95096 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NKX2-2O95096 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NKX2-2O95096 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms