Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.55■■□□□ 1.04
SMARCA5O60264 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 TSPY19P-201ENST00000418461 509 ntBASIC21.55■■□□□ 1.04
SMARCA5O60264 TSPY18P-201ENST00000441642 509 ntBASIC21.55■■□□□ 1.04
SMARCA5O60264 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.55■■□□□ 1.04
SMARCA5O60264 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 KRT16P4-201ENST00000453883 522 ntBASIC21.55■■□□□ 1.04
SMARCA5O60264 UNC93B7-201ENST00000509439 705 ntBASIC21.55■■□□□ 1.04
SMARCA5O60264 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 PRELID1P1-202ENST00000567272 903 ntBASIC21.55■■□□□ 1.04
SMARCA5O60264 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.55■■□□□ 1.04
SMARCA5O60264 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SMARCA5O60264 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SMARCA5O60264 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 PCDHA12-202ENST00000613593 2588 ntBASIC21.54■■□□□ 1.04
SMARCA5O60264 AC138932.1-201ENST00000534164 6830 ntBASIC21.54■■□□□ 1.04
SMARCA5O60264 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCA5O60264 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.54■■□□□ 1.04
SMARCA5O60264 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SMARCA5O60264 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SMARCA5O60264 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 STK19B-204ENST00000512515 211 ntBASIC21.54■■□□□ 1.04
SMARCA5O60264 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.54■■□□□ 1.04
SMARCA5O60264 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.54■■□□□ 1.04
SMARCA5O60264 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SMARCA5O60264 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SMARCA5O60264 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.53■■□□□ 1.04
SMARCA5O60264 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCA5O60264 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 ABCD1P5-201ENST00000445663 754 ntBASIC21.53■■□□□ 1.04
SMARCA5O60264 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.53■■□□□ 1.04
SMARCA5O60264 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCA5O60264 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCA5O60264 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SMARCA5O60264 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SMARCA5O60264 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 AC009336.1-201ENST00000608941 1553 ntBASIC21.53■■□□□ 1.04
SMARCA5O60264 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCA5O60264 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SMARCA5O60264 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCA5O60264 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCA5O60264 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.52■■□□□ 1.04
SMARCA5O60264 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCA5O60264 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SMARCA5O60264 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCA5O60264 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCA5O60264 MYCLP1-201ENST00000372451 1075 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms