Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
XRCC2O43543 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.21■□□□□ 0.03
XRCC2O43543 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XRCC2O43543 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 LYSMD4-203ENST00000378904 2122 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
XRCC2O43543 PCED1CP-201ENST00000419887 785 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 TSSC2-201ENST00000450217 709 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 AC009533.2-201ENST00000543664 586 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 AC111152.3-201ENST00000569699 673 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
XRCC2O43543 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 AC005336.2-201ENST00000593183 939 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
XRCC2O43543 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
XRCC2O43543 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
XRCC2O43543 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
XRCC2O43543 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.21■□□□□ 0.03
XRCC2O43543 AC084018.2-201ENST00000613093 2607 ntBASIC15.21■□□□□ 0.03
XRCC2O43543 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.21■□□□□ 0.02
XRCC2O43543 IER3-202ENST00000376377 1350 ntBASIC15.21■□□□□ 0.02
XRCC2O43543 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
XRCC2O43543 AC016734.2-201ENST00000624325 1377 ntBASIC15.21■□□□□ 0.02
XRCC2O43543 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
XRCC2O43543 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.21■□□□□ 0.02
XRCC2O43543 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.21■□□□□ 0.02
XRCC2O43543 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.21■□□□□ 0.02
XRCC2O43543 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
XRCC2O43543 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.2■□□□□ 0.02
XRCC2O43543 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
XRCC2O43543 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 AL845331.1-201ENST00000424978 1190 ntBASIC15.2■□□□□ 0.02
XRCC2O43543 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.2■□□□□ 0.02
XRCC2O43543 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.2■□□□□ 0.02
XRCC2O43543 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.2■□□□□ 0.02
XRCC2O43543 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.2■□□□□ 0.02
XRCC2O43543 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.2■□□□□ 0.02
XRCC2O43543 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.2■□□□□ 0.02
XRCC2O43543 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
XRCC2O43543 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
XRCC2O43543 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
XRCC2O43543 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.19■□□□□ 0.02
XRCC2O43543 KRT18P1-202ENST00000452408 1331 ntBASIC15.19■□□□□ 0.02
XRCC2O43543 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.19■□□□□ 0.02
XRCC2O43543 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
XRCC2O43543 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.19■□□□□ 0.02
XRCC2O43543 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms