Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLOCKO15516 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.64■□□□□ 0.25
CLOCKO15516 FAM87A-204ENST00000613235 858 ntBASIC16.64■□□□□ 0.25
CLOCKO15516 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.64■□□□□ 0.25
CLOCKO15516 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLOCKO15516 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLOCKO15516 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLOCKO15516 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 AC073508.3-201ENST00000619697 1419 ntBASIC16.63■□□□□ 0.25
CLOCKO15516 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLOCKO15516 REXO1L11P-201ENST00000620964 1927 ntBASIC16.63■□□□□ 0.25
CLOCKO15516 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.63■□□□□ 0.25
CLOCKO15516 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 MIR4674-201ENST00000582457 87 ntBASIC16.63■□□□□ 0.25
CLOCKO15516 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.63■□□□□ 0.25
CLOCKO15516 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.63■□□□□ 0.25
CLOCKO15516 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.63■□□□□ 0.25
CLOCKO15516 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLOCKO15516 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.62■□□□□ 0.25
CLOCKO15516 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 HMGA1P5-201ENST00000412453 271 ntBASIC16.62■□□□□ 0.25
CLOCKO15516 SLC25A1P2-201ENST00000430693 912 ntBASIC16.62■□□□□ 0.25
CLOCKO15516 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.62■□□□□ 0.25
CLOCKO15516 DUX4L26-201ENST00000489078 1255 ntBASIC16.62■□□□□ 0.25
CLOCKO15516 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.62■□□□□ 0.25
CLOCKO15516 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.62■□□□□ 0.25
CLOCKO15516 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.62■□□□□ 0.25
CLOCKO15516 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLOCKO15516 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLOCKO15516 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.62■□□□□ 0.25
CLOCKO15516 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLOCKO15516 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
CLOCKO15516 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms