Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01558Q9Y6Z2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.02□□□□□ -0.96
LINC01558Q9Y6Z2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01558Q9Y6Z2 AC010327.5-201ENST00000586923 3061 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CICP24-201ENST00000605464 2705 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 AL033527.3-201ENST00000566366 1196 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 AC068587.9-201ENST00000641814 219 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 KRT8P9-201ENST00000558927 1449 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 LINC01101-201ENST00000622953 1884 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 AC106881.1-201ENST00000605849 3329 ntBASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01558Q9Y6Z2 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 AC124283.5-201ENST00000624661 1809 ntBASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LINC01558Q9Y6Z2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms