Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR3Q9UNL2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSR3Q9UNL2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSR3Q9UNL2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SSR3Q9UNL2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 LYSMD4-203ENST00000378904 2122 ntBASIC15.64■□□□□ 0.09
SSR3Q9UNL2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 AL353807.1-201ENST00000427475 662 ntBASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSR3Q9UNL2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AC008687.5-201ENST00000593746 558 ntBASIC15.63■□□□□ 0.09
SSR3Q9UNL2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AL513523.2-202ENST00000427283 2040 ntBASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AC092068.3-201ENST00000587894 2016 ntBASIC15.63■□□□□ 0.09
SSR3Q9UNL2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 AC022188.1-201ENST00000620960 1664 ntBASIC15.63■□□□□ 0.09
SSR3Q9UNL2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SSR3Q9UNL2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.62■□□□□ 0.09
SSR3Q9UNL2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms