Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 STARP1-201ENST00000397973 869 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 HCG4P8-203ENST00000443049 980 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 AL136038.3-201ENST00000561909 1096 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 MIR3180-4-201ENST00000582223 153 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 AC069148.1-201ENST00000608741 768 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 AC009102.3-201ENST00000623118 1491 ntBASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.16■□□□□ 0.66
CALCOCO1Q9P1Z2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 OR6D1P-203ENST00000641209 4860 ntBASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 MIR149-201ENST00000384879 89 ntBASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.15■□□□□ 0.66
CALCOCO1Q9P1Z2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CALCOCO1Q9P1Z2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 DUSP5P1-201ENST00000441325 1139 ntBASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 SPDYE13P-201ENST00000445314 798 ntBASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 ZNF444P1-201ENST00000559497 298 ntBASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CALCOCO1Q9P1Z2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms