Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CBX8Q9HC52 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 AL391005.1-201ENST00000623953 2435 ntBASIC19.55■□□□□ 0.72
CBX8Q9HC52 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CBX8Q9HC52 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CBX8Q9HC52 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CBX8Q9HC52 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CBX8Q9HC52 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 TSPY7P-201ENST00000431358 1114 ntBASIC19.54■□□□□ 0.72
CBX8Q9HC52 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 AC004263.2-201ENST00000617183 678 ntBASIC19.54■□□□□ 0.72
CBX8Q9HC52 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
CBX8Q9HC52 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CBX8Q9HC52 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 TMEM191A-211ENST00000637163 1067 ntBASIC19.53■□□□□ 0.72
CBX8Q9HC52 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.53■□□□□ 0.72
CBX8Q9HC52 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CBX8Q9HC52 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.52■□□□□ 0.72
CBX8Q9HC52 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.52■□□□□ 0.72
CBX8Q9HC52 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CBX8Q9HC52 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms