Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 AC116353.5-201ENST00000638148 1699 ntBASIC21.49■■□□□ 1.03
UPF2Q9HAU5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.49■■□□□ 1.03
UPF2Q9HAU5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UPF2Q9HAU5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 LINC01311-201ENST00000565162 1445 ntBASIC21.48■■□□□ 1.03
UPF2Q9HAU5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 AP000525.1-201ENST00000608286 694 ntBASIC21.48■■□□□ 1.03
UPF2Q9HAU5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
UPF2Q9HAU5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UPF2Q9HAU5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 AC005104.2-201ENST00000427818 678 ntBASIC21.46■■□□□ 1.03
UPF2Q9HAU5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 AL158047.1-201ENST00000445918 881 ntBASIC21.46■■□□□ 1.03
UPF2Q9HAU5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 AC128688.1-201ENST00000487626 519 ntBASIC21.46■■□□□ 1.03
UPF2Q9HAU5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 NEK4P2-201ENST00000580004 1012 ntBASIC21.46■■□□□ 1.03
UPF2Q9HAU5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms