Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL445228.2-201ENST00000605589 952 ntBASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 AC114341.1-201ENST00000618070 349 ntBASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDLIM5Q96HC4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AC104819.1-201ENST00000504587 486 ntBASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AC074051.2-201ENST00000565115 352 ntBASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 AP000867.4-201ENST00000641616 219 ntBASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDLIM5Q96HC4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 ARMC10P1-201ENST00000313754 855 ntBASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 AC096582.2-201ENST00000510860 516 ntBASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 AC073592.5-201ENST00000624854 528 ntBASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 AL135999.2-201ENST00000622438 1686 ntBASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDLIM5Q96HC4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms