Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TRIM11Q96F44 AC080080.1-201ENST00000625121 2420 ntBASIC18.51■□□□□ 0.55
TRIM11Q96F44 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM11Q96F44 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM11Q96F44 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM11Q96F44 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 AC046185.3-201ENST00000623228 1824 ntBASIC18.5■□□□□ 0.55
TRIM11Q96F44 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM11Q96F44 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM11Q96F44 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 AD000864.1-201ENST00000624076 2295 ntBASIC18.49■□□□□ 0.55
TRIM11Q96F44 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 NTF6B-201ENST00000591913 560 ntBASIC18.49■□□□□ 0.55
TRIM11Q96F44 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 AL049757.1-201ENST00000616842 1596 ntBASIC18.49■□□□□ 0.55
TRIM11Q96F44 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM11Q96F44 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM11Q96F44 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 FAM86EP-206ENST00000510506 987 ntBASIC18.48■□□□□ 0.55
TRIM11Q96F44 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM11Q96F44 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM11Q96F44 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms