Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
USP6NLQ92738 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6NLQ92738 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6NLQ92738 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6NLQ92738 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
USP6NLQ92738 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.69■□□□□ 0.74
USP6NLQ92738 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6NLQ92738 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.69■□□□□ 0.74
USP6NLQ92738 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
USP6NLQ92738 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.69■□□□□ 0.74
USP6NLQ92738 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP6NLQ92738 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6NLQ92738 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6NLQ92738 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.68■□□□□ 0.74
USP6NLQ92738 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP6NLQ92738 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.68■□□□□ 0.74
USP6NLQ92738 AC138761.1-201ENST00000584393 385 ntBASIC19.68■□□□□ 0.74
USP6NLQ92738 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 AC009093.7-201ENST00000623853 1223 ntBASIC19.68■□□□□ 0.74
USP6NLQ92738 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.68■□□□□ 0.74
USP6NLQ92738 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP6NLQ92738 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.68■□□□□ 0.74
USP6NLQ92738 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6NLQ92738 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6NLQ92738 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 AL627223.1-201ENST00000416693 442 ntBASIC19.67■□□□□ 0.74
USP6NLQ92738 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.67■□□□□ 0.74
USP6NLQ92738 AC112191.1-201ENST00000523689 701 ntBASIC19.67■□□□□ 0.74
USP6NLQ92738 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP6NLQ92738 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6NLQ92738 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
USP6NLQ92738 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6NLQ92738 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.67■□□□□ 0.74
USP6NLQ92738 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6NLQ92738 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
USP6NLQ92738 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6NLQ92738 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6NLQ92738 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6NLQ92738 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms