Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 CDCA4P2-201ENST00000441182 718 ntBASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 AC026185.1-201ENST00000445748 174 ntBASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 AC093525.9-201ENST00000624961 1746 ntBASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 HYMAI-201ENST00000635591 3347 ntBASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L1Q8WWY6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC011506.1-201ENST00000474329 610 ntBASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AP002982.1-201ENST00000492365 877 ntBASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC124947.2-201ENST00000547118 1133 ntBASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC104390.1-201ENST00000555663 520 ntBASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.74□□□□□ -0.21
MBD3L1Q8WWY6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 KRT16P1-201ENST00000399124 1418 ntBASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MBD3L1Q8WWY6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms